Full Link:
STRINGSTRING
panD protein (Psychrobacter cryohalolentis) - STRING interaction network
"panD" - Aspartate alpha-decarboxylase in Psychrobacter cryohalolentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panDAspartate alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine (126 aa)    
Predicted Functional Partners:
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate (287 aa)
 
  0.994
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (266 aa)
 
   
  0.933
Pcryo_1815
Aldehyde dehydrogenase (491 aa)
         
  0.900
Pcryo_1015
Aldehyde dehydrogenase (496 aa)
         
  0.900
Pcryo_0895
Aldehyde dehydrogenase (496 aa)
         
  0.900
Pcryo_0819
4-aminobutyrate aminotransferase (446 aa)
         
    0.900
Pcryo_0599
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (635 aa)
   
 
  0.887
pyrB
Aspartate carbamoyltransferase catalytic subunit (357 aa)
       
  0.816
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (429 aa)
       
    0.806
Pcryo_1417
Aspartate ammonia-lyase (470 aa)
         
  0.802
Your Current Organism:
Psychrobacter cryohalolentis
NCBI taxonomy Id: 335284
Other names: P. cryohalolentis, P. cryohalolentis K5, Psychrobacter cryohalolentis, Psychrobacter cryohalolentis Bakermans et al. 2006, Psychrobacter cryohalolentis K5, Psychrobacter cryohalolentis str. K5, Psychrobacter cryohalolentis strain K5
Server load: low (6%) [HD]