Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABE74207.1 | ABE75102.1 | Pcryo_0424 | Pcryo_1321 | FHA domain containing protein. | Serine/threonine protein kinase. | 0.798 |
ABE74207.1 | ABE75495.1 | Pcryo_0424 | Pcryo_1718 | FHA domain containing protein. | Serine/threonine protein kinase. | 0.757 |
ABE74207.1 | ABE76216.1 | Pcryo_0424 | Pcryo_2439 | FHA domain containing protein. | Serine/threonine protein kinase. | 0.776 |
ABE74207.1 | ABE76245.1 | Pcryo_0424 | Pcryo_2468 | FHA domain containing protein. | PAS/PAC sensor hybrid histidine kinase. | 0.590 |
ABE75101.1 | ABE75102.1 | Pcryo_1320 | Pcryo_1321 | Major facilitator superfamily MFS_1. | Serine/threonine protein kinase. | 0.939 |
ABE75101.1 | ABE75103.1 | Pcryo_1320 | Pcryo_1322 | Major facilitator superfamily MFS_1. | Assimilatory nitrate reductase (NADH) beta subunit. | 0.981 |
ABE75101.1 | ABE75104.1 | Pcryo_1320 | Pcryo_1323 | Major facilitator superfamily MFS_1. | Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.984 |
ABE75102.1 | ABE74207.1 | Pcryo_1321 | Pcryo_0424 | Serine/threonine protein kinase. | FHA domain containing protein. | 0.798 |
ABE75102.1 | ABE75101.1 | Pcryo_1321 | Pcryo_1320 | Serine/threonine protein kinase. | Major facilitator superfamily MFS_1. | 0.939 |
ABE75102.1 | ABE75103.1 | Pcryo_1321 | Pcryo_1322 | Serine/threonine protein kinase. | Assimilatory nitrate reductase (NADH) beta subunit. | 0.695 |
ABE75102.1 | ABE75104.1 | Pcryo_1321 | Pcryo_1323 | Serine/threonine protein kinase. | Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.775 |
ABE75102.1 | ABE75495.1 | Pcryo_1321 | Pcryo_1718 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.846 |
ABE75102.1 | ABE76216.1 | Pcryo_1321 | Pcryo_2439 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.825 |
ABE75102.1 | ABE76243.1 | Pcryo_1321 | Pcryo_2466 | Serine/threonine protein kinase. | Fmu (Sun); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.709 |
ABE75102.1 | ABE76245.1 | Pcryo_1321 | Pcryo_2468 | Serine/threonine protein kinase. | PAS/PAC sensor hybrid histidine kinase. | 0.696 |
ABE75102.1 | fmt | Pcryo_1321 | Pcryo_2467 | Serine/threonine protein kinase. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.772 |
ABE75102.1 | rsgA | Pcryo_1321 | Pcryo_1735 | Serine/threonine protein kinase. | GTPase EngC; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.659 |
ABE75103.1 | ABE75101.1 | Pcryo_1322 | Pcryo_1320 | Assimilatory nitrate reductase (NADH) beta subunit. | Major facilitator superfamily MFS_1. | 0.981 |
ABE75103.1 | ABE75102.1 | Pcryo_1322 | Pcryo_1321 | Assimilatory nitrate reductase (NADH) beta subunit. | Serine/threonine protein kinase. | 0.695 |
ABE75103.1 | ABE75104.1 | Pcryo_1322 | Pcryo_1323 | Assimilatory nitrate reductase (NADH) beta subunit. | Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.999 |
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