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panD protein (Syntrophobacter fumaroxidans) - STRING interaction network
"panD" - Aspartate 1-decarboxylase in Syntrophobacter fumaroxidans
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
panDAspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine (124 aa)    
Predicted Functional Partners:
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate; Belongs to the pantothenate synthetase family (283 aa)
  0.999
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate; Belongs to the PanB family (282 aa)
 
   
  0.947
Sfum_2925
PFAM- aminotransferase class-III; KEGG- sat-SYN_01215 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (474 aa)
         
    0.900
Sfum_2649
PFAM- aminotransferase class-III; KEGG- aba-Acid345_3989 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (441 aa)
         
    0.900
Sfum_0605
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (579 aa)
   
 
  0.879
Sfum_2438
TIGRFAM- aspartate ammonia-lyase; PFAM- fumarate lyase; KEGG- ade-Adeh_1757 aspartate ammonia-lyase (466 aa)
         
  0.826
Sfum_1842
PFAM- fumarate lyase; KEGG- pca-Pcar_1630 aspartate ammonia-lyase, putative (470 aa)
         
  0.826
Sfum_0589
PFAM- fumarate lyase; KEGG- rfr-Rfer_3846 fumarate lyase (467 aa)
         
  0.826
Sfum_1665
PFAM- aminotransferase, class I and II; KEGG- gsu-GSU1242 aspartate aminotransferase (398 aa)
       
  0.824
Sfum_1171
Aminotransferase; PFAM- aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; KEGG- pca-Pcar_1888 aspartate aminotransferase (396 aa)
       
  0.824
Your Current Organism:
Syntrophobacter fumaroxidans
NCBI taxonomy Id: 335543
Other names: S. fumaroxidans MPOB, Syntrophobacter fumaroxidans, Syntrophobacter fumaroxidans DSM 10017, Syntrophobacter fumaroxidans MPOB, Syntrophobacter fumaroxidans str. MPOB, Syntrophobacter fumaroxidans strain MPOB
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