Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Sfum_0912 | htpX | Sfum_0912 | Sfum_1269 | PFAM: protein of unknown function UPF0005; KEGG: pca:Pcar_0302 hypothetical protein; Belongs to the BI1 family. | HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B; PFAM: peptidase M48, Ste24p; KEGG: sat:SYN_03628 endopeptidase HtpX; Belongs to the peptidase M48B family. | 0.558 |
| Sfum_1268 | clpB | Sfum_1268 | Sfum_0263 | PFAM: heat shock protein Hsp20; KEGG: sru:SRU_2359 heat shock protein, class I; Belongs to the small heat shock protein (HSP20) family. | ATPase AAA-2 domain protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.741 |
| Sfum_1268 | grpE | Sfum_1268 | Sfum_1035 | PFAM: heat shock protein Hsp20; KEGG: sru:SRU_2359 heat shock protein, class I; Belongs to the small heat shock protein (HSP20) family. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.478 |
| Sfum_1268 | htpX | Sfum_1268 | Sfum_1269 | PFAM: heat shock protein Hsp20; KEGG: sru:SRU_2359 heat shock protein, class I; Belongs to the small heat shock protein (HSP20) family. | HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B; PFAM: peptidase M48, Ste24p; KEGG: sat:SYN_03628 endopeptidase HtpX; Belongs to the peptidase M48B family. | 0.540 |
| Sfum_1270 | htpX | Sfum_1270 | Sfum_1269 | Hypothetical protein. | HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B; PFAM: peptidase M48, Ste24p; KEGG: sat:SYN_03628 endopeptidase HtpX; Belongs to the peptidase M48B family. | 0.519 |
| Sfum_1925 | htpX | Sfum_1925 | Sfum_1269 | Hypothetical protein; KEGG: bld:BLi02343 YpbR. | HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B; PFAM: peptidase M48, Ste24p; KEGG: sat:SYN_03628 endopeptidase HtpX; Belongs to the peptidase M48B family. | 0.837 |
| Sfum_2043 | htpX | Sfum_2043 | Sfum_1269 | PFAM: protein of unknown function DUF533; KEGG: sat:SYN_00004 hypothetical cytosolic protein. | HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B; PFAM: peptidase M48, Ste24p; KEGG: sat:SYN_03628 endopeptidase HtpX; Belongs to the peptidase M48B family. | 0.617 |
| clpB | Sfum_1268 | Sfum_0263 | Sfum_1268 | ATPase AAA-2 domain protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | PFAM: heat shock protein Hsp20; KEGG: sru:SRU_2359 heat shock protein, class I; Belongs to the small heat shock protein (HSP20) family. | 0.741 |
| clpB | grpE | Sfum_0263 | Sfum_1035 | ATPase AAA-2 domain protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.881 |
| clpB | htpX | Sfum_0263 | Sfum_1269 | ATPase AAA-2 domain protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B; PFAM: peptidase M48, Ste24p; KEGG: sat:SYN_03628 endopeptidase HtpX; Belongs to the peptidase M48B family. | 0.472 |
| ftsH | grpE | Sfum_0551 | Sfum_1035 | Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.449 |
| ftsH | htpX | Sfum_0551 | Sfum_1269 | Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B; PFAM: peptidase M48, Ste24p; KEGG: sat:SYN_03628 endopeptidase HtpX; Belongs to the peptidase M48B family. | 0.516 |
| ftsH-2 | grpE | Sfum_3197 | Sfum_1035 | FtsH-2 peptidase. Metallo peptidase. MEROPS family M41; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; In the central section; belongs to the AAA ATPase family. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.449 |
| ftsH-2 | htpX | Sfum_3197 | Sfum_1269 | FtsH-2 peptidase. Metallo peptidase. MEROPS family M41; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; In the central section; belongs to the AAA ATPase family. | HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B; PFAM: peptidase M48, Ste24p; KEGG: sat:SYN_03628 endopeptidase HtpX; Belongs to the peptidase M48B family. | 0.472 |
| ftsH-3 | grpE | Sfum_3438 | Sfum_1035 | FtsH-2 peptidase. Metallo peptidase. MEROPS family M41; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.449 |
| ftsH-3 | htpX | Sfum_3438 | Sfum_1269 | FtsH-2 peptidase. Metallo peptidase. MEROPS family M41; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B; PFAM: peptidase M48, Ste24p; KEGG: sat:SYN_03628 endopeptidase HtpX; Belongs to the peptidase M48B family. | 0.472 |
| grpE | Sfum_1268 | Sfum_1035 | Sfum_1268 | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | PFAM: heat shock protein Hsp20; KEGG: sru:SRU_2359 heat shock protein, class I; Belongs to the small heat shock protein (HSP20) family. | 0.478 |
| grpE | clpB | Sfum_1035 | Sfum_0263 | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | ATPase AAA-2 domain protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.881 |
| grpE | ftsH | Sfum_1035 | Sfum_0551 | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.449 |
| grpE | ftsH-2 | Sfum_1035 | Sfum_3197 | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | FtsH-2 peptidase. Metallo peptidase. MEROPS family M41; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; In the central section; belongs to the AAA ATPase family. | 0.449 |
page 1 of 2