node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplA | rplI | Sfum_1546 | Sfum_3185 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L9P; Binds to the 23S rRNA. | 0.993 |
rplA | rplM | Sfum_1546 | Sfum_1669 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.997 |
rplA | rplT | Sfum_1546 | Sfum_0427 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.994 |
rplA | rplU | Sfum_1546 | Sfum_3639 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
rplA | rpmA | Sfum_1546 | Sfum_3640 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein L27; KEGG: dps:DP2591 probable 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.992 |
rplA | rpmI | Sfum_1546 | Sfum_0426 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein L35; KEGG: dps:DP1426 probable 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.992 |
rplA | rpsF | Sfum_1546 | Sfum_3188 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.995 |
rplA | rpsI | Sfum_1546 | Sfum_1668 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein S9; KEGG: pca:Pcar_1899 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.994 |
rplA | rpsO | Sfum_1546 | Sfum_1233 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.993 |
rplA | rpsR | Sfum_1546 | Sfum_3187 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.994 |
rplI | rplA | Sfum_3185 | Sfum_1546 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.993 |
rplI | rplM | Sfum_3185 | Sfum_1669 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.992 |
rplI | rplT | Sfum_3185 | Sfum_0427 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.993 |
rplI | rplU | Sfum_3185 | Sfum_3639 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.994 |
rplI | rpmA | Sfum_3185 | Sfum_3640 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein L27; KEGG: dps:DP2591 probable 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.993 |
rplI | rpmI | Sfum_3185 | Sfum_0426 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein L35; KEGG: dps:DP1426 probable 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.975 |
rplI | rpsF | Sfum_3185 | Sfum_3188 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.996 |
rplI | rpsI | Sfum_3185 | Sfum_1668 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein S9; KEGG: pca:Pcar_1899 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.993 |
rplI | rpsO | Sfum_3185 | Sfum_1233 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.988 |
rplI | rpsR | Sfum_3185 | Sfum_3187 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.998 |