STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfum_3218Glutaredoxin; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin; glucose-inhibited division protein A; KEGG: mhu:Mhun_3049 glutaredoxin. (395 aa)    
Predicted Functional Partners:
Sfum_1708
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: dde:Dde_2067 thioredoxin; Belongs to the thioredoxin family.
 
  
 0.912
Sfum_3219
TIGRFAM: Glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin; glutaredoxin 2; KEGG: tma:TM1031 glutaredoxin.
  
  
 0.758
Sfum_3874
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin; KEGG: dvu:DVU0283 AhpF family protein/thioredoxin reductase.
 
  
0.686
Sfum_3217
Hypothetical protein.
       0.626
Sfum_1721
PFAM: Catalase domain protein; KEGG: dvu:DVUA0091 catalase; Belongs to the catalase family.
  
  
 0.596
Sfum_3216
Hypothetical protein.
       0.592
Sfum_0698
Thioredoxin-disulfide reductase; PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dde:Dde_2151 thioredoxin reductase, putative.
 
  
0.527
Sfum_3215
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; domain of unknown function DUF1731.
       0.494
Sfum_4051
PFAM: cysteinyl-tRNA synthetase, class Ia; KEGG: bpm:BURPS1710b_0659 hypothetical protein.
  
   
 0.479
Sfum_0029
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_0069 ABC transporter related.
  
     0.471
Your Current Organism:
Syntrophobacter fumaroxidans
NCBI taxonomy Id: 335543
Other names: S. fumaroxidans MPOB, Syntrophobacter fumaroxidans DSM 10017, Syntrophobacter fumaroxidans MPOB, Syntrophobacter fumaroxidans str. MPOB, Syntrophobacter fumaroxidans strain MPOB, Syntrophobacter sp. DSM 10017, syntrophic propionate-oxidizing bacterium DSM 10017
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