STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobFPrecorrin 6A synthase. (249 aa)    
Predicted Functional Partners:
cobM
Precorrin-4 C11-methyltransferase.
 
 
 0.998
cobK
Cobalt-precorrin-6x reductase.
 
 
 0.998
cobL
Precorrin-6y methyltransferase.
 
 
 0.992
cobE
Precorrin methylase.
 
 
 0.991
cobJ
precorrin-3B C17-methyltransferase.
 
 
 0.986
cobH
precorrin-8X methylmutase.
 
 
 0.986
cbiP
Cobyric acid synthase.
 
  
 0.914
S23_47400
Hypothetical protein.
 
 
 0.885
cobB
Cobyrinic acid a,c-diamide synthase.
 
  
 0.876
cobI
Precorrin-2 C20-methyltransferase.
 
   
 0.844
Your Current Organism:
Bradyrhizobium sp. S23321
NCBI taxonomy Id: 335659
Other names: B. sp. S23321, alpha proteobacterium S23321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.