STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRM5tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. (465 aa)    
Predicted Functional Partners:
UREG_01395
DNA-directed RNA polymerase II 16 kDa polypeptide.
 
  
   0.912
UREG_01360
Golgi mannosyltransferase complex component.
 
      0.859
UREG_01424
Uncharacterized protein.
 
      0.797
UREG_01390
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
 
      0.533
UREG_01881
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
      0.518
UREG_00315
Uncharacterized protein.
    
 0.452
UREG_01397
zf-GRF domain-containing protein.
 
      0.421
UREG_01398
PX domain-containing protein.
 
      0.413
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
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