STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UREG_00220Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1349 aa)    
Predicted Functional Partners:
UREG_00218
PKD_channel domain-containing protein.
 
    
 0.902
UREG_02806
Uncharacterized protein; Belongs to the synaptobrevin family.
 
    
 0.504
UREG_07088
Uncharacterized protein.
      
 0.501
UREG_00196
GLTP domain-containing protein.
 
      0.487
UREG_04430
CULLIN_2 domain-containing protein; Belongs to the cullin family.
 
  
   0.483
UREG_07121
B30.2/SPRY domain-containing protein.
 
      0.463
UREG_01661
RNA helicase.
 
 
    0.429
UREG_00708
30S ribosomal protein S12.
 
      0.428
UREG_01480
CPSF_A domain-containing protein.
   
    0.418
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.