STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UREG_03966Matrin-type domain-containing protein. (501 aa)    
Predicted Functional Partners:
UREG_00483
Uncharacterized protein.
   
 0.999
UREG_05322
Matrin-type domain-containing protein.
    
 0.999
UREG_00677
Uncharacterized protein.
   
 0.997
UREG_04061
PSP domain-containing protein.
   
 0.996
UREG_03156
Splicing factor 3B subunit 4.
    
 0.996
UREG_03498
Pre-mRNA splicing factor rse1.
   
 0.996
UREG_03442
Uncharacterized protein.
   
 0.995
UREG_00987
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
   
 0.994
UREG_01851
U2 snRNP component prp10.
   
 0.993
UREG_02330
Sm domain-containing protein.
   
 0.991
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.