STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UREG_04257CCR4-NOT transcription complex subunit 7. (497 aa)    
Predicted Functional Partners:
UREG_05823
Cell differentiation protein rcd1.
   
 0.998
UREG_07356
Uncharacterized protein.
   
 0.998
UREG_01281
RING-type domain-containing protein.
    
 0.996
UREG_00611
Endo/exonuclease/phosphatase domain-containing protein.
    
 0.996
UREG_06158
Uncharacterized protein.
    
 0.994
UREG_00711
PAT1 domain-containing protein.
    
 
 0.989
UREG_06980
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.986
UREG_07095
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.950
UREG_02263
NOT2_3_5 domain-containing protein.
   
 0.941
UREG_04870
Uncharacterized protein.
    
 0.927
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
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