STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UREG_04729Flavodoxin-like domain-containing protein. (784 aa)    
Predicted Functional Partners:
UREG_05216
tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.
  
 
 0.765
UREG_04488
TYW3 domain-containing protein.
  
  
 0.755
UREG_06663
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
  0.708
UREG_05220
JmjC domain-containing protein.
  
  
 0.701
UREG_02026
Cysteine dioxygenase.
 
      0.692
UREG_00692
Uncharacterized protein.
 
      0.636
UREG_07441
GatB_Yqey domain-containing protein.
     
 0.613
UREG_03788
Cysteinyl-tRNA synthetase.
      
 0.612
UREG_02899
Molybdenum cofactor biosynthesis protein 1 A.
      
 0.501
UREG_03424
ATP-binding cassette sub-family E member 1.
   
  
 0.500
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
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