STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UREG_05159Calponin-homology (CH) domain-containing protein. (647 aa)    
Predicted Functional Partners:
UREG_01340
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.824
UREG_04085
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.824
UREG_00917
Fimbrin.
   
 
 0.823
UREG_02421
Myosin regulatory light chain cdc4.
   
 0.753
UREG_03296
Calmodulin; Belongs to the calmodulin family.
   
 0.753
UREG_00932
WD_REPEATS_REGION domain-containing protein.
   
 
 0.706
UREG_03525
Uncharacterized protein.
   
 
 0.697
UREG_05920
Tubulin beta chain; Belongs to the tubulin family.
   
 
 0.697
UREG_00588
Uncharacterized protein.
   
 0.681
UREG_03878
Nucleoside diphosphate kinase.
    
 
 0.666
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
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