STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UREG_06828PDCD2_C domain-containing protein. (435 aa)    
Predicted Functional Partners:
UREG_06846
T-complex protein 1, zeta subunit.
 
      0.794
UREG_02370
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.701
UREG_04674
Uncharacterized protein.
   
  
 0.601
UREG_06155
Alpha-carbonic anhydrase domain-containing protein.
   
  
 0.569
UREG_04357
Uncharacterized protein.
   
  
 0.538
UREG_03801
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
    0.418
UREG_01304
Uncharacterized protein.
   
  
 0.416
UREG_04922
WD_REPEATS_REGION domain-containing protein.
   
  
 0.414
UREG_05625
RRM domain-containing protein.
   
    0.402
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
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