Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
UREG_01473 | UREG_01628 | C4JID6 | C4JJ21 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | 0.911 |
UREG_01473 | UREG_01707 | C4JID6 | C4JJA0 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.584 |
UREG_01473 | UREG_02971 | C4JID6 | C4JNH3 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.904 |
UREG_01473 | UREG_03325 | C4JID6 | C4JQI0 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetoacetate-CoA ligase. | 0.949 |
UREG_01473 | UREG_03622 | C4JID6 | C4JLB4 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.911 |
UREG_01473 | UREG_05293 | C4JID6 | C4JS54 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.913 |
UREG_01473 | UREG_05484 | C4JID6 | C4JSP5 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | 0.956 |
UREG_01473 | UREG_06412 | C4JID6 | C4JXN9 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Pyruvate carboxyltransferase domain-containing protein. | 0.933 |
UREG_01473 | UREG_07400 | C4JID6 | C4JYZ9 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.994 |
UREG_01473 | UREG_07436 | C4JID6 | C4JZ35 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Uncharacterized protein. | 0.647 |
UREG_01628 | UREG_01473 | C4JJ21 | C4JID6 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.911 |
UREG_01628 | UREG_02971 | C4JJ21 | C4JNH3 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.912 |
UREG_01628 | UREG_03325 | C4JJ21 | C4JQI0 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | Acetoacetate-CoA ligase. | 0.504 |
UREG_01628 | UREG_03622 | C4JJ21 | C4JLB4 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.904 |
UREG_01628 | UREG_05293 | C4JJ21 | C4JS54 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.903 |
UREG_01628 | UREG_05484 | C4JJ21 | C4JSP5 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | 0.915 |
UREG_01628 | UREG_06412 | C4JJ21 | C4JXN9 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | Pyruvate carboxyltransferase domain-containing protein. | 0.933 |
UREG_01628 | UREG_07400 | C4JJ21 | C4JYZ9 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.987 |
UREG_01628 | UREG_07436 | C4JJ21 | C4JZ35 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | Uncharacterized protein. | 0.699 |
UREG_01707 | UREG_01473 | C4JJA0 | C4JID6 | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.584 |
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