STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00077000Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (493 aa)    
Predicted Functional Partners:
CKAN_00763800
26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.
   
 0.998
CKAN_02438500
26S proteasome non-ATPase regulatory subunit 4.
   
 0.998
CKAN_00073300
26S proteasome non-ATPase regulatory subunit 12 A.
   
 0.996
CKAN_00186000
26S proteasome non-ATPase regulatory subunit 12 A.
   
 0.996
CKAN_01332600
26S proteasome regulatory subunit 7A; Belongs to the AAA ATPase family.
   
 0.995
CKAN_02046600
26S proteasome non-ATPase regulatory subunit 7 A.
   
 0.995
CKAN_02516800
26S protease regulatory subunit 7A; Belongs to the AAA ATPase family.
   
 0.995
CKAN_02457300
26S proteasome regulatory particle triple-A ATPase protein; Belongs to the AAA ATPase family.
   
 0.995
CKAN_00487100
26S protease regulatory subunit 6A A.
   
 0.995
CKAN_01940700
26S proteasome non-ATPase regulatory subunit 7 A.
   
 0.995
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.