STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01469200Alcohol dehydrogenase superfamily. (359 aa)    
Predicted Functional Partners:
CKAN_02012100
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
     
 0.781
CKAN_02529900
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
    
 0.780
CKAN_00142700
Acetyl-coenzyme A synthetase.
    
 0.761
CKAN_00086800
Putative acyl-activating enzyme 18, peroxisomal isoform X1.
    
 0.761
CKAN_00771400
Threonine dehydratase.
  
 0.761
CKAN_00973100
Ca2+ sensor EF-Hand superfamily.
    
 0.761
CKAN_00937700
L-idonate 5-dehydrogenase.
  
0.759
CKAN_01653800
Sorbitol dehydrogenase isoform X2.
  
0.759
CKAN_00048000
Syntaxin-71; Belongs to the syntaxin family.
  
 0.759
CKAN_02101200
Serine racemase.
  
 0.759
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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