STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01544300Peptidase M20. (436 aa)    
Predicted Functional Partners:
CKAN_00714100
Nitrate reductase NADH-like protein.
    
  0.913
CKAN_01923800
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.913
CKAN_02206300
Nitrate reductase 2.
    
  0.913
CKAN_02206400
Nitrate reductase NADH-like protein.
    
  0.913
CKAN_01115700
Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1.
    
 0.753
CKAN_00007600
Thymidine kinase a-like protein; Belongs to the thymidine kinase family.
    
 0.731
CKAN_00766600
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
    
 0.692
CKAN_00079400
Phosphoglycerate mutase.
    
 0.692
CKAN_01244500
Phosphoglycerate mutase.
    
 0.692
CKAN_02203800
Semialdehyde dehydrogenase.
   
 0.667
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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