STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00876300L10-interacting MYB domain-containing-like protein isoform X1. (160 aa)    
Predicted Functional Partners:
CKAN_02215300
L10-interacting MYB domain-containing-like protein.
  
     0.510
CKAN_00137900
Putative nuclease HARBI1.
  
     0.455
CKAN_01226700
CAI-1 autoinducer sensor kinase/phosphatase cqsS isoform 1.
  
     0.449
CKAN_00473600
Putative nuclease HARBI1.
  
     0.415
CKAN_00882800
Putative nuclease HARBI1.
  
     0.405
CKAN_01537400
Putative nuclease HARBI1.
  
     0.402
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.