STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01961100Argonaute/Dicer protein; Belongs to the argonaute family. (1089 aa)    
Predicted Functional Partners:
CKAN_01667700
Putative endoribonuclease dicer-like protein 1; Belongs to the helicase family. Dicer subfamily.
   
 0.859
CKAN_00387500
Dicer-like protein 4.
   
 0.846
CKAN_00231800
Ribonuclease III domain-containing protein; Belongs to the helicase family. Dicer subfamily.
   
 0.846
CKAN_00268700
Endoribonuclease Dicer 2 isoform X1; Belongs to the helicase family. Dicer subfamily.
   
 0.837
CKAN_00268800
Ribonuclease III domain-containing protein.
   
 0.837
CKAN_02676700
Ribonuclease 3-like protein 2 isoform X1.
   
 0.835
CKAN_02676600
Ribonuclease 3-like protein 2 isoform X1.
   
 0.835
CKAN_00118000
Translin.
   
 0.723
CKAN_00314500
Translin-associated protein X.
    
 0.720
CKAN_01839300
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.712
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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