STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcar_0097ABC transporter, membrane protein, ABC-2 family. (264 aa)    
Predicted Functional Partners:
Pcar_0096
ABC transporter, ATP-binding protein.
  
 0.977
Pcar_1576
ABC transporter, membrane protein.
  
  
  0.651
Pcar_1575
ABC transporter, ATP-binding protein.
  
 0.597
tatC
Twin-arginine translocation pathway protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
  
    0.547
Pcar_2142
ABC transporter, ATP-binding protein.
 
  
 0.523
tatB
Twin-arginine translocation pathway protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
    0.518
Pcar_0095
Sensor diguanylate cyclase, CHASE domain-containing; Domains: CHASE, GGDEF.
       0.484
Pcar_0348
Ferredoxin and NADH nitroreductase domain protein.
  
  
 0.450
Pcar_0500
Ferredoxin and NADH nitroreductase domain protein.
  
  
 0.450
Pcar_0509
Nitroreductase-like family 3 protein.
  
  
 0.422
Your Current Organism:
Pelobacter carbinolicus
NCBI taxonomy Id: 338963
Other names: P. carbinolicus DSM 2380, Pelobacter carbinolicus DSM 2380, Pelobacter carbinolicus Gra Bd 1, Pelobacter carbinolicus str. DSM 2380, Pelobacter carbinolicus strain DSM 2380
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.