Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pcar_0276 | Pcar_0628 | Pcar_0276 | Pcar_0628 | Nucleotidyltransferase. | Phosphoenolpyruvate phosphomutase. | 0.702 |
Pcar_0276 | Pcar_1129 | Pcar_0276 | Pcar_1129 | Nucleotidyltransferase. | dTDP-4-dehydrorhamnose 3,5-epimerase. | 0.750 |
Pcar_0276 | rmlA | Pcar_0276 | Pcar_2595 | Nucleotidyltransferase. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.905 |
Pcar_0276 | rmlC | Pcar_0276 | Pcar_2596 | Nucleotidyltransferase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.778 |
Pcar_0628 | Pcar_0276 | Pcar_0628 | Pcar_0276 | Phosphoenolpyruvate phosphomutase. | Nucleotidyltransferase. | 0.702 |
Pcar_0628 | Pcar_0629 | Pcar_0628 | Pcar_0629 | Phosphoenolpyruvate phosphomutase. | D-3-phosphoglycerate dehydrogenase-related protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.750 |
Pcar_0628 | Pcar_0630 | Pcar_0628 | Pcar_0630 | Phosphoenolpyruvate phosphomutase. | Hypothetical protein. | 0.725 |
Pcar_0628 | Pcar_1129 | Pcar_0628 | Pcar_1129 | Phosphoenolpyruvate phosphomutase. | dTDP-4-dehydrorhamnose 3,5-epimerase. | 0.754 |
Pcar_0628 | Pcar_1242 | Pcar_0628 | Pcar_1242 | Phosphoenolpyruvate phosphomutase. | Medium-chain acyl-CoA synthetase. | 0.725 |
Pcar_0628 | Pcar_2772 | Pcar_0628 | Pcar_2772 | Phosphoenolpyruvate phosphomutase. | Aspartate/glutamate/phosphoserine/alanine/cystea te aminotransferase, putative. | 0.670 |
Pcar_0628 | gltA | Pcar_0628 | Pcar_1991 | Phosphoenolpyruvate phosphomutase. | Citrate synthase; Belongs to the citrate synthase family. | 0.952 |
Pcar_0628 | rmlA | Pcar_0628 | Pcar_2595 | Phosphoenolpyruvate phosphomutase. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.702 |
Pcar_0628 | rmlC | Pcar_0628 | Pcar_2596 | Phosphoenolpyruvate phosphomutase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.754 |
Pcar_0628 | selB | Pcar_0628 | Pcar_0832 | Phosphoenolpyruvate phosphomutase. | Selenocysteine-specific translation elongation factor. | 0.918 |
Pcar_0629 | Pcar_0628 | Pcar_0629 | Pcar_0628 | D-3-phosphoglycerate dehydrogenase-related protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoenolpyruvate phosphomutase. | 0.750 |
Pcar_0629 | Pcar_0630 | Pcar_0629 | Pcar_0630 | D-3-phosphoglycerate dehydrogenase-related protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Hypothetical protein. | 0.785 |
Pcar_0629 | Pcar_2772 | Pcar_0629 | Pcar_2772 | D-3-phosphoglycerate dehydrogenase-related protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Aspartate/glutamate/phosphoserine/alanine/cystea te aminotransferase, putative. | 0.455 |
Pcar_0630 | Pcar_0628 | Pcar_0630 | Pcar_0628 | Hypothetical protein. | Phosphoenolpyruvate phosphomutase. | 0.725 |
Pcar_0630 | Pcar_0629 | Pcar_0630 | Pcar_0629 | Hypothetical protein. | D-3-phosphoglycerate dehydrogenase-related protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.785 |
Pcar_1129 | Pcar_0276 | Pcar_1129 | Pcar_0276 | dTDP-4-dehydrorhamnose 3,5-epimerase. | Nucleotidyltransferase. | 0.750 |
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