STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcar_1181Adenylate/guanylate cyclase; Domains: CHD, TPR. (1134 aa)    
Predicted Functional Partners:
Pcar_0452
Cyclic nucleotide-binding protein.
 
 0.863
Pcar_1182
Hypothetical protein.
     
 0.832
Pcar_0878
Cyclic nucleotide-binding domain transcriptional regulator; Domains: cNMP-BD.
  
 0.761
fnr-1
Transcriptional regulator, Crp/Fnr family.
  
 0.761
fnr-2
Transcriptional regulator, Crp/Fnr family.
  
 0.761
Pcar_0053
Sensor histidine kinase, PAS domain-containing; Domains: PAS, HisKA, HATPase_c.
   
 
 0.730
Pcar_2938
Sensor histidine kinase response receiver; Domains: HisKA, REC.
   
 
 0.721
Pcar_0181
Histidine kinase; Domains: PAS, PAS, HisKA, HATPase_c, REC.
 
 
 
 0.707
Pcar_1949
Sensor histidine kinase response regulator, HAMP domain-containing; Domains: HAMP, HisKA, HATPase_c, REC.
   
 
 0.697
Pcar_1056
Sensor histidine kinase response regulator, Hpt domain-containing; Domains: HisKA, HATPase_c, REC, REC, Hpt.
  
 
 0.695
Your Current Organism:
Pelobacter carbinolicus
NCBI taxonomy Id: 338963
Other names: P. carbinolicus DSM 2380, Pelobacter carbinolicus DSM 2380, Pelobacter carbinolicus Gra Bd 1, Pelobacter carbinolicus str. DSM 2380, Pelobacter carbinolicus strain DSM 2380
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.