STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgAGlycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (484 aa)    
Predicted Functional Partners:
malQ
4-alpha-glucanotransferase.
 
 
 0.984
Pcar_1731
Alpha-glucan phosphorylase.
 
  
 0.974
Pcar_2955
Glycoside hydrolase, putative.
  
 0.961
treT
ADP:alpha-glucose alpha-glucosyltransferase.
  
  
 0.914
Pcar_2958
Mannose-1-phosphate guanylyltransferase and mannose-6-phosphate isomerase-related protein.
  
 
 0.838
Pcar_1246
NAD-dependent aldehyde dehydrogenase, CoA-acylating.
  
  
 0.805
Pcar_2758
NAD-dependent aldehyde dehydrogenase, CoA-acylating.
  
  
 0.805
Pcar_2851
NAD-dependent aldehyde dehydrogenase, CoA-acylating.
  
  
 0.805
Pcar_2953
Hypothetical protein.
       0.773
galT
UDP-glucose--galactose-1-phosphate uridylyltransferase.
 
  
 0.612
Your Current Organism:
Pelobacter carbinolicus
NCBI taxonomy Id: 338963
Other names: P. carbinolicus DSM 2380, Pelobacter carbinolicus DSM 2380, Pelobacter carbinolicus Gra Bd 1, Pelobacter carbinolicus str. DSM 2380, Pelobacter carbinolicus strain DSM 2380
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.