Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ppro_0611 | Ppro_0612 | Ppro_0611 | Ppro_0612 | KEGG: sat:SYN_01039 hypothetical cytosolic protein. | PFAM: amino acid-binding ACT domain protein; KEGG: pca:Pcar_2118 ACT domain-with protein; Belongs to the UPF0237 family. | 0.508 |
Ppro_0611 | Ppro_0613 | Ppro_0611 | Ppro_0613 | KEGG: sat:SYN_01039 hypothetical cytosolic protein. | PFAM: protein of unknown function DUF711; KEGG: pca:Pcar_2119 conserved hypothetical cytosolic protein. | 0.495 |
Ppro_0612 | Ppro_0611 | Ppro_0612 | Ppro_0611 | PFAM: amino acid-binding ACT domain protein; KEGG: pca:Pcar_2118 ACT domain-with protein; Belongs to the UPF0237 family. | KEGG: sat:SYN_01039 hypothetical cytosolic protein. | 0.508 |
Ppro_0612 | Ppro_0613 | Ppro_0612 | Ppro_0613 | PFAM: amino acid-binding ACT domain protein; KEGG: pca:Pcar_2118 ACT domain-with protein; Belongs to the UPF0237 family. | PFAM: protein of unknown function DUF711; KEGG: pca:Pcar_2119 conserved hypothetical cytosolic protein. | 0.949 |
Ppro_0613 | Ppro_0611 | Ppro_0613 | Ppro_0611 | PFAM: protein of unknown function DUF711; KEGG: pca:Pcar_2119 conserved hypothetical cytosolic protein. | KEGG: sat:SYN_01039 hypothetical cytosolic protein. | 0.495 |
Ppro_0613 | Ppro_0612 | Ppro_0613 | Ppro_0612 | PFAM: protein of unknown function DUF711; KEGG: pca:Pcar_2119 conserved hypothetical cytosolic protein. | PFAM: amino acid-binding ACT domain protein; KEGG: pca:Pcar_2118 ACT domain-with protein; Belongs to the UPF0237 family. | 0.949 |
Ppro_0613 | gatB | Ppro_0613 | Ppro_3089 | PFAM: protein of unknown function DUF711; KEGG: pca:Pcar_2119 conserved hypothetical cytosolic protein. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.401 |
gatB | Ppro_0613 | Ppro_3089 | Ppro_0613 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | PFAM: protein of unknown function DUF711; KEGG: pca:Pcar_2119 conserved hypothetical cytosolic protein. | 0.401 |