node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ppro_0002 | Ppro_0949 | Ppro_0002 | Ppro_0949 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.985 |
Ppro_0002 | rnhB | Ppro_0002 | Ppro_1092 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.947 |
Ppro_0949 | Ppro_0002 | Ppro_0949 | Ppro_0002 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.985 |
Ppro_0949 | Ppro_3365 | Ppro_0949 | Ppro_3365 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: pca:Pcar_2776 2-acyl-glycerophospho-ethanolamine acyltransferase. | 0.529 |
Ppro_0949 | rnhA | Ppro_0949 | Ppro_2939 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.919 |
Ppro_0949 | rnhB | Ppro_0949 | Ppro_1092 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.936 |
Ppro_0949 | trmD | Ppro_0949 | Ppro_1095 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.503 |
Ppro_1091 | rnhB | Ppro_1091 | Ppro_1092 | PFAM: metallophosphoesterase; KEGG: sat:SYN_00534 phosphoesterase. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.773 |
Ppro_1091 | rplS | Ppro_1091 | Ppro_1093 | PFAM: metallophosphoesterase; KEGG: sat:SYN_00534 phosphoesterase. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.685 |
Ppro_1091 | trmD | Ppro_1091 | Ppro_1095 | PFAM: metallophosphoesterase; KEGG: sat:SYN_00534 phosphoesterase. | tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.553 |
Ppro_3365 | Ppro_0949 | Ppro_3365 | Ppro_0949 | PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: pca:Pcar_2776 2-acyl-glycerophospho-ethanolamine acyltransferase. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.529 |
Ppro_3365 | Ppro_3516 | Ppro_3365 | Ppro_3516 | PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: pca:Pcar_2776 2-acyl-glycerophospho-ethanolamine acyltransferase. | NADH dehydrogenase subunit F; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: pca:Pcar_1604 NADH:ubiquinone oxidoreductase subunit. | 0.821 |
Ppro_3365 | rnhB | Ppro_3365 | Ppro_1092 | PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: pca:Pcar_2776 2-acyl-glycerophospho-ethanolamine acyltransferase. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.775 |
Ppro_3516 | Ppro_3365 | Ppro_3516 | Ppro_3365 | NADH dehydrogenase subunit F; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: pca:Pcar_1604 NADH:ubiquinone oxidoreductase subunit. | PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: pca:Pcar_2776 2-acyl-glycerophospho-ethanolamine acyltransferase. | 0.821 |
Ppro_3516 | rnhB | Ppro_3516 | Ppro_1092 | NADH dehydrogenase subunit F; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: pca:Pcar_1604 NADH:ubiquinone oxidoreductase subunit. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.833 |
lpxB | rnhB | Ppro_3024 | Ppro_1092 | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.817 |
queH | rnhB | Ppro_1651 | Ppro_1092 | Protein of unknown function DUF208; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr). | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.810 |
rnhA | Ppro_0949 | Ppro_2939 | Ppro_0949 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.919 |
rnhA | rnhB | Ppro_2939 | Ppro_1092 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.841 |
rnhB | Ppro_0002 | Ppro_1092 | Ppro_0002 | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.947 |