STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_1306PFAM: peptidase C1A, papain; KEGG: gsu:GSU2675 hypothetical protein. (688 aa)    
Predicted Functional Partners:
Ppro_1134
PFAM: Citrate synthase; KEGG: sth:STH2542 citrate synthase; Belongs to the citrate synthase family.
    
   0.784
Ppro_2730
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.759
Ppro_3007
Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.759
Ppro_2627
PFAM: protein of unknown function DUF1555; KEGG: gsu:GSU1943 hypothetical protein.
     
 0.630
Ppro_1822
PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: aba:Acid345_0859 AAA ATPase.
  
 
 0.610
Ppro_0362
PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: sdn:Sden_2996 AAA ATPase, central region.
  
 
 0.600
Ppro_1882
PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: wsu:WS1660 AAA family ATPase.
    
 0.537
Ppro_2170
PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: gme:Gmet_0905 AAA ATPase, central region.
    
 0.537
Ppro_1305
Hypothetical protein.
       0.496
rpsK
SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
   
 0.447
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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