STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpmFTIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: gme:Gmet_1597 ribosomal protein S32; Belongs to the bacterial ribosomal protein bL32 family. (61 aa)    
Predicted Functional Partners:
rpsP
PFAM: ribosomal protein S16; KEGG: gsu:GSU0643 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
 
 
 0.994
rplL
LSU ribosomal protein L12P / LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
  
 
 0.993
rplQ
PFAM: ribosomal protein L17; KEGG: gsu:GSU2830 ribosomal protein L17.
  
 
 0.993
rpsF
SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.
  
 
 0.993
rpmI
PFAM: ribosomal protein L35; KEGG: gme:Gmet_1413 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
  
 
 0.993
rpmB
PFAM: ribosomal protein L28; KEGG: gsu:GSU2234 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
 
 0.993
rplU
LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
 
 0.992
rpmG
PFAM: ribosomal protein L33; KEGG: gsu:GSU2870 ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
  
 
 0.992
rpsL
SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.
   
 
 0.992
rpsO
SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
  
 
 0.992
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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