STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_3190PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; KEGG: ade:Adeh_2567 NADH dehydrogenase (ubiquinone). (403 aa)    
Predicted Functional Partners:
Ppro_3191
TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; KEGG: atc:AGR_C_2342 NADH dehydrogenase I chain C.
 0.998
Ppro_3516
NADH dehydrogenase subunit F; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: pca:Pcar_1604 NADH:ubiquinone oxidoreductase subunit.
  
 0.998
Ppro_3192
KEGG: ade:Adeh_2569 NADH-quinone oxidoreductase, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit.
 0.997
nuoB1
NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity).
 0.994
Ppro_1624
KEGG: ade:Adeh_2569 NADH-quinone oxidoreductase, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit.
 0.994
Ppro_3187
NADH dehydrogenase subunit G; PFAM: ferredoxin; molybdopterin oxidoreductase Fe4S4 region; KEGG: ade:Adeh_2566 ferredoxin.
 
 0.994
Ppro_0630
TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; KEGG: atc:AGR_C_2342 NADH dehydrogenase I chain C.
 0.993
Ppro_1625
TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; KEGG: atc:AGR_C_2342 NADH dehydrogenase I chain C.
 0.993
Ppro_3181
KEGG: gme:Gmet_3343 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
 
 0.993
Ppro_3186
PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: ade:Adeh_2565 respiratory-chain NADH dehydrogenase, subunit 1.
 
 0.993
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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