STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rfer_1890Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)    
Predicted Functional Partners:
Rfer_2272
3-hydroxyacyl-CoA dehydrogenase.
 0.977
Rfer_4070
acyl-CoA dehydrogenase-like.
 
 0.957
Rfer_1009
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.954
Rfer_0224
3-hydroxyacyl-CoA dehydrogenase.
 0.953
Rfer_4068
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.953
Rfer_3838
acyl-CoA dehydrogenase-like.
  
 0.949
Rfer_3842
isovaleryl-CoA dehydrogenase.
  
 0.949
Rfer_2754
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase.
0.935
Rfer_3830
3-methylcrotonoyl-CoA carboxylase, alpha subunit.
  
 0.931
Rfer_3832
Propionyl-CoA carboxylase.
  
 0.924
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.