node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rfer_1542 | trmB | Rfer_1542 | Rfer_1896 | Conserved hypothetical protein. | Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.669 |
Rfer_1894 | Rfer_1895 | Rfer_1894 | Rfer_1895 | Major facilitator superfamily MFS_1. | Pseudouridine synthase. | 0.694 |
Rfer_1894 | trmB | Rfer_1894 | Rfer_1896 | Major facilitator superfamily MFS_1. | Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.678 |
Rfer_1895 | Rfer_1894 | Rfer_1895 | Rfer_1894 | Pseudouridine synthase. | Major facilitator superfamily MFS_1. | 0.694 |
Rfer_1895 | trmB | Rfer_1895 | Rfer_1896 | Pseudouridine synthase. | Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.925 |
Rfer_2518 | rlmD | Rfer_2518 | Rfer_2778 | Conserved hypothetical protein. | 23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.681 |
Rfer_2518 | rlmE | Rfer_2518 | Rfer_2010 | Conserved hypothetical protein. | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.707 |
Rfer_2518 | rpmD | Rfer_2518 | Rfer_4225 | Conserved hypothetical protein. | LSU ribosomal protein L30P. | 0.743 |
Rfer_2518 | trmB | Rfer_2518 | Rfer_1896 | Conserved hypothetical protein. | Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.744 |
Rfer_2518 | truA | Rfer_2518 | Rfer_1790 | Conserved hypothetical protein. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.455 |
Rfer_2518 | truB | Rfer_2518 | Rfer_2136 | Conserved hypothetical protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.531 |
rlmD | Rfer_2518 | Rfer_2778 | Rfer_2518 | 23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | Conserved hypothetical protein. | 0.681 |
rlmD | rlmE | Rfer_2778 | Rfer_2010 | 23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.417 |
rlmD | trmB | Rfer_2778 | Rfer_1896 | 23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.601 |
rlmD | truB | Rfer_2778 | Rfer_2136 | 23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.458 |
rlmE | Rfer_2518 | Rfer_2010 | Rfer_2518 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | Conserved hypothetical protein. | 0.707 |
rlmE | rlmD | Rfer_2010 | Rfer_2778 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.417 |
rlmE | rpmD | Rfer_2010 | Rfer_4225 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | LSU ribosomal protein L30P. | 0.928 |
rlmE | trmB | Rfer_2010 | Rfer_1896 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.616 |
rlmE | truA | Rfer_2010 | Rfer_1790 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.593 |