STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
citGTriphosphoribosyl-dephospho-CoA synthase. (302 aa)    
Predicted Functional Partners:
Rfer_2406
Holo-citrate lyase synthase.
 
 0.998
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.977
Rfer_2410
Citrate lyase ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
  
 0.975
Rfer_2407
Citrate lyase, alpha subunit.
 
  
 0.974
Rfer_2408
Citrate lyase, beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.963
Rfer_1844
Malonate decarboxylase delta subunit.
 
  
 0.883
Rfer_4171
Citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.857
Rfer_4179
Citrate lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.857
Rfer_3486
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.838
Rfer_2404
Protein of unknown function DUF1234.
       0.775
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.