Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rfer_1053 | Rfer_3235 | Rfer_1053 | Rfer_3235 | Hypothetical protein. | AAA ATPase. | 0.410 |
Rfer_1053 | glpK | Rfer_1053 | Rfer_3678 | Hypothetical protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.727 |
Rfer_1199 | Rfer_2259 | Rfer_1199 | Rfer_2259 | Hypothetical protein. | Ankyrin. | 0.862 |
Rfer_1199 | Rfer_3235 | Rfer_1199 | Rfer_3235 | Hypothetical protein. | AAA ATPase. | 0.699 |
Rfer_1199 | alaS | Rfer_1199 | Rfer_0590 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.670 |
Rfer_1199 | glpK | Rfer_1199 | Rfer_3678 | Hypothetical protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.966 |
Rfer_2259 | Rfer_1199 | Rfer_2259 | Rfer_1199 | Ankyrin. | Hypothetical protein. | 0.862 |
Rfer_2259 | Rfer_3235 | Rfer_2259 | Rfer_3235 | Ankyrin. | AAA ATPase. | 0.847 |
Rfer_2259 | alaS | Rfer_2259 | Rfer_0590 | Ankyrin. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.549 |
Rfer_2259 | glpK | Rfer_2259 | Rfer_3678 | Ankyrin. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.794 |
Rfer_2333 | Rfer_3670 | Rfer_2333 | Rfer_3670 | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | FAD dependent oxidoreductase. | 0.920 |
Rfer_2333 | Rfer_3677 | Rfer_2333 | Rfer_3677 | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Transcriptional regulator, DeoR family. | 0.574 |
Rfer_2333 | glpK | Rfer_2333 | Rfer_3678 | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.991 |
Rfer_2333 | plsY | Rfer_2333 | Rfer_2695 | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.916 |
Rfer_2439 | glpK | Rfer_2439 | Rfer_3678 | Alcohol dehydrogenase, zinc-binding. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.920 |
Rfer_3235 | Rfer_1053 | Rfer_3235 | Rfer_1053 | AAA ATPase. | Hypothetical protein. | 0.410 |
Rfer_3235 | Rfer_1199 | Rfer_3235 | Rfer_1199 | AAA ATPase. | Hypothetical protein. | 0.699 |
Rfer_3235 | Rfer_2259 | Rfer_3235 | Rfer_2259 | AAA ATPase. | Ankyrin. | 0.847 |
Rfer_3235 | glpK | Rfer_3235 | Rfer_3678 | AAA ATPase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.816 |
Rfer_3670 | Rfer_2333 | Rfer_3670 | Rfer_2333 | FAD dependent oxidoreductase. | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.920 |
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