Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rfer_1231 | Rfer_2284 | Rfer_1231 | Rfer_2284 | Hypothetical protein. | Putative adenylate/guanylate cyclase. | 0.839 |
Rfer_1231 | Rfer_3940 | Rfer_1231 | Rfer_3940 | Hypothetical protein. | FHA domain containing protein. | 0.837 |
Rfer_1231 | Rfer_3941 | Rfer_1231 | Rfer_3941 | Hypothetical protein. | Protein serine/threonine phosphatases. | 0.622 |
Rfer_1627 | Rfer_2284 | Rfer_1627 | Rfer_2284 | Serine/threonine protein kinase. | Putative adenylate/guanylate cyclase. | 0.807 |
Rfer_1627 | Rfer_3940 | Rfer_1627 | Rfer_3940 | Serine/threonine protein kinase. | FHA domain containing protein. | 0.864 |
Rfer_1627 | Rfer_3941 | Rfer_1627 | Rfer_3941 | Serine/threonine protein kinase. | Protein serine/threonine phosphatases. | 0.869 |
Rfer_2214 | Rfer_2284 | Rfer_2214 | Rfer_2284 | Dihydrolipoamide dehydrogenase. | Putative adenylate/guanylate cyclase. | 0.569 |
Rfer_2214 | Rfer_3019 | Rfer_2214 | Rfer_3019 | Dihydrolipoamide dehydrogenase. | Glycine cleavage system T protein. | 0.992 |
Rfer_2214 | Rfer_3940 | Rfer_2214 | Rfer_3940 | Dihydrolipoamide dehydrogenase. | FHA domain containing protein. | 0.553 |
Rfer_2214 | Rfer_3941 | Rfer_2214 | Rfer_3941 | Dihydrolipoamide dehydrogenase. | Protein serine/threonine phosphatases. | 0.822 |
Rfer_2214 | Rfer_4101 | Rfer_2214 | Rfer_4101 | Dihydrolipoamide dehydrogenase. | Formyl transferase-like. | 0.491 |
Rfer_2284 | Rfer_1231 | Rfer_2284 | Rfer_1231 | Putative adenylate/guanylate cyclase. | Hypothetical protein. | 0.839 |
Rfer_2284 | Rfer_1627 | Rfer_2284 | Rfer_1627 | Putative adenylate/guanylate cyclase. | Serine/threonine protein kinase. | 0.807 |
Rfer_2284 | Rfer_2214 | Rfer_2284 | Rfer_2214 | Putative adenylate/guanylate cyclase. | Dihydrolipoamide dehydrogenase. | 0.569 |
Rfer_2284 | Rfer_2728 | Rfer_2284 | Rfer_2728 | Putative adenylate/guanylate cyclase. | Serine/threonine protein kinase. | 0.808 |
Rfer_2284 | Rfer_3940 | Rfer_2284 | Rfer_3940 | Putative adenylate/guanylate cyclase. | FHA domain containing protein. | 0.516 |
Rfer_2284 | Rfer_3941 | Rfer_2284 | Rfer_3941 | Putative adenylate/guanylate cyclase. | Protein serine/threonine phosphatases. | 0.617 |
Rfer_2284 | Rfer_3942 | Rfer_2284 | Rfer_3942 | Putative adenylate/guanylate cyclase. | Serine/threonine protein kinase with Chase2 sensor. | 0.903 |
Rfer_2728 | Rfer_2284 | Rfer_2728 | Rfer_2284 | Serine/threonine protein kinase. | Putative adenylate/guanylate cyclase. | 0.808 |
Rfer_2728 | Rfer_3940 | Rfer_2728 | Rfer_3940 | Serine/threonine protein kinase. | FHA domain containing protein. | 0.857 |
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