STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_01446Translation machinery-associated protein 20; Involved in translation; Belongs to the TMA20 family. (189 aa)    
Predicted Functional Partners:
HCAG_01889
SUI1 domain-containing protein.
   
 
 0.987
HCAG_01447
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
 
 
    0.878
HCAG_01171
Uncharacterized protein.
   
 
 0.828
HCAG_01178
SUI1 domain-containing protein.
   
 
 0.828
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
   0.583
HCAG_07249
40S ribosomal protein S9.
   
 
 0.575
HCAG_06613
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.568
HCAG_04926
Queuosine salvage protein; Involved in salvaging queuosine.
 
      0.564
HCAG_08821
Ribosomal protein S20.
   
   0.555
HCAG_04662
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.553
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
Server load: low (22%) [HD]