STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_03017Glycyl-tRNA synthetase 1. (582 aa)    
Predicted Functional Partners:
HCAG_03018
Uncharacterized protein.
 
      0.896
HCAG_02559
DNA polymerase gamma.
   
 
 0.861
ALA1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
  
 
 0.845
HCAG_03112
Seryl-tRNA synthetase.
   
  
 0.826
HCAG_05229
Leucyl-tRNA synthetase.
  
 
 0.823
HCAG_05931
Tyrosine--tRNA ligase.
  
  
 0.815
HCAG_06841
Leucyl-tRNA synthetase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.809
HCAG_06694
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.808
HCAG_02764
Valyl-tRNA synthetase 2; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.805
HCAG_00616
tRNA-synt_1e domain-containing protein.
  
 
 0.787
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.