STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_04572Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (417 aa)    
Predicted Functional Partners:
HCAG_05804
Tr-type G domain-containing protein.
   
 
 0.993
HCAG_07031
WD_REPEATS_REGION domain-containing protein.
    
 
 0.923
HCAG_08798
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.910
HCAG_03381
ATP-binding cassette sub-family E member 1.
  
 
 0.903
HCAG_01666
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 
 0.901
HCAG_08821
Ribosomal protein S20.
    
 
 0.889
HCAG_03168
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.876
HCAG_08092
40S ribosomal protein S17.
    
 
 0.875
HCAG_01947
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.872
HCAG_04246
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
    
 
 0.869
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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