STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_05242USP domain-containing protein; Belongs to the peptidase C19 family. (433 aa)    
Predicted Functional Partners:
HCAG_07296
SCA7 domain-containing protein.
    
 0.997
HCAG_08435
SGF29 C-terminal domain-containing protein.
   
 0.995
HCAG_08771
Bromo domain-containing protein.
    
 0.994
HCAG_00425
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.988
HCAG_00857
Uncharacterized protein.
    
 0.983
HCAG_03602
Uncharacterized protein.
    
 0.983
HCAG_02360
Uncharacterized protein.
    
 0.981
HCAG_06728
Spt3.
    
 0.976
HCAG_06091
Polyubiquitin.
    
 0.968
HCAG_04750
Uncharacterized protein.
   
 0.963
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.