STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_05804Tr-type G domain-containing protein. (957 aa)    
Predicted Functional Partners:
HCAG_03200
RNase_PH domain-containing protein.
    
 0.996
HCAG_04572
Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
   
 
 0.993
HCAG_05940
RNase_PH domain-containing protein.
    
 0.982
HCAG_03457
ECR1_N domain-containing protein.
    
 0.974
HCAG_05387
KH_dom_type_1 domain-containing protein.
    
 0.973
HCAG_07214
Uncharacterized protein.
    
 0.973
HCAG_04484
RNase_PH domain-containing protein.
    
 0.971
HCAG_02509
Uncharacterized protein.
    
 0.951
HCAG_07286
Uncharacterized protein.
    
 0.933
HCAG_06423
Sec2p domain-containing protein.
    
 0.927
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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