Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rpl10e | rpl24e | Msp_0327 | Msp_0631 | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. | 50S ribosomal protein L24e; Binds to the 23S rRNA. | 0.999 |
rpl10e | rpl31e | Msp_0327 | Msp_0597 | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. | 50S ribosomal protein L31e; Belongs to the ribosomal protein L31e family. | 0.999 |
rpl10e | rplX | Msp_0327 | Msp_0599 | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. | RplX; 50S ribosomal protein LX. | 0.999 |
rpl10e | rps17e | Msp_0327 | Msp_0106 | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. | 30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family. | 0.999 |
rpl10e | rps19e | Msp_0327 | Msp_0594 | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. | 30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. | 0.999 |
rpl10e | rps24e | Msp_0327 | Msp_0621 | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. | 30S ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.999 |
rpl10e | rps28e | Msp_0327 | Msp_0632 | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. | 30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family. | 0.999 |
rpl10e | rps30p | Msp_0327 | Msp_0010 | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. | 30S ribosomal protein S15P. | 0.999 |
rpl10e | rps4e | Msp_0327 | Msp_0896 | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. | 30S ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.999 |
rpl10e | rps6e | Msp_0327 | Msp_0628 | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. | 30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.999 |
rpl24e | rpl10e | Msp_0631 | Msp_0327 | 50S ribosomal protein L24e; Binds to the 23S rRNA. | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
rpl24e | rpl31e | Msp_0631 | Msp_0597 | 50S ribosomal protein L24e; Binds to the 23S rRNA. | 50S ribosomal protein L31e; Belongs to the ribosomal protein L31e family. | 0.999 |
rpl24e | rplX | Msp_0631 | Msp_0599 | 50S ribosomal protein L24e; Binds to the 23S rRNA. | RplX; 50S ribosomal protein LX. | 0.999 |
rpl24e | rps17e | Msp_0631 | Msp_0106 | 50S ribosomal protein L24e; Binds to the 23S rRNA. | 30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family. | 0.999 |
rpl24e | rps19e | Msp_0631 | Msp_0594 | 50S ribosomal protein L24e; Binds to the 23S rRNA. | 30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. | 0.999 |
rpl24e | rps24e | Msp_0631 | Msp_0621 | 50S ribosomal protein L24e; Binds to the 23S rRNA. | 30S ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.999 |
rpl24e | rps28e | Msp_0631 | Msp_0632 | 50S ribosomal protein L24e; Binds to the 23S rRNA. | 30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family. | 0.999 |
rpl24e | rps30p | Msp_0631 | Msp_0010 | 50S ribosomal protein L24e; Binds to the 23S rRNA. | 30S ribosomal protein S15P. | 0.999 |
rpl24e | rps4e | Msp_0631 | Msp_0896 | 50S ribosomal protein L24e; Binds to the 23S rRNA. | 30S ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.999 |
rpl24e | rps6e | Msp_0631 | Msp_0628 | 50S ribosomal protein L24e; Binds to the 23S rRNA. | 30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.999 |
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