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XCC0006 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0006" - Uncharacterized protein in Xanthomonas campestris campestris
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
XCC0006Uncharacterized protein; Zn-dependent protease with chaperone function (268 aa)    
Predicted Functional Partners:
slt
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (677 aa)
   
        0.723
XCC0005
Uncharacterized protein; Predicted metal-dependent membrane protease (278 aa)
              0.709
XCC1436
Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family (241 aa)
   
        0.680
XCC1686
Uncharacterized protein; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases (333 aa)
     
        0.580
XCC0007
Uncharacterized protein; FOG- TPR repeat (398 aa)
   
        0.554
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (814 aa)
         
  0.545
yrbD
Toluene tolerance protein; ABC-type transport system involved in resistance to organic solvents periplasmic component (180 aa)
     
        0.509
tptC
ABC transporter ATP-binding protein; ABC-type antimicrobial peptide transport system, ATPase component (229 aa)
   
        0.503
creB
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (256 aa)
     
        0.495
dnaJ1
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] (376 aa)
   
 
  0.487
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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