STRINGSTRING
XCC0007 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0007" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0007Uncharacterized protein; FOG- TPR repeat (398 aa)    
Predicted Functional Partners:
XCC2250
annotation not available (196 aa)
   
          0.776
XCC1129
annotation not available (393 aa)
   
          0.771
XCC0193
annotation not available (300 aa)
   
          0.769
XCC3958
annotation not available (150 aa)
   
          0.761
XCC3848
annotation not available (220 aa)
   
          0.758
XCC2267
annotation not available (229 aa)
   
        0.755
XCC1742
annotation not available (172 aa)
   
          0.754
ilvM
Acetolactate synthase (isozyme II) small (regulatory) subunit (85 aa)
   
          0.753
XCC3899
annotation not available (120 aa)
   
          0.752
XCC2788
Uncharacterized protein conserved in bacteria (387 aa)
   
          0.752
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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