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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exbB1Biopolymer transport protein ExbB; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates. Protects ExbD from proteolytic degradation and functionally stabilizes TonB (By similarity) (253 aa)    
Predicted Functional Partners:
exbD1
Biopolymer transport protein exbD1; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates
 
 0.992
tonB1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (By similarity)
 
 
 0.991
exbD2
Biopolymer transport protein exbD2; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates
 
 0.988
exbD4
annotation not available
 
 
 0.968
tonB
Periplasmic protein TonB, links inner and outer membranes
 
 
 0.944
exbD3
Macromolecule import protein; Biopolymer transport protein
 
 0.919
tolR
TolR protein; Biopolymer transport protein
 
 
 0.919
XCC2927
Periplasmic protein TonB links inner and outer membranes
  
 
 0.884
XCC1593
Periplasmic protein TonB, links inner and outer membranes
 
 
 0.872
XCC2081
annotation not available
 
 
 0.751
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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