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STRINGSTRING
exbD1 protein (Xanthomonas campestris campestris) - STRING interaction network
"exbD1" - Biopolymer transport protein exbD1 in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
exbD1Biopolymer transport protein exbD1; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates (140 aa)    
Predicted Functional Partners:
exbB1
Biopolymer transport protein ExbB; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates. Protects ExbD from proteolytic degradation and functionally stabilizes TonB (By similarity) (253 aa)
 
  0.992
tonB1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (By similarity) (223 aa)
 
 
  0.957
exbD2
Biopolymer transport protein exbD2; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates (136 aa)
 
     
0.910
tolQ
TolQ protein; Biopolymer transport proteins (259 aa)
 
 
  0.898
exbB2
annotation not available (222 aa)
   
 
  0.855
tonB
Periplasmic protein TonB, links inner and outer membranes (224 aa)
 
 
  0.855
XCC2927
Periplasmic protein TonB links inner and outer membranes (291 aa)
   
 
  0.814
XCC1593
Periplasmic protein TonB, links inner and outer membranes (217 aa)
 
 
  0.692
ompP6
Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family (172 aa)
 
 
  0.663
XCC2081
annotation not available (140 aa)
 
 
  0.649
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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