STRINGSTRING
XCC0016 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0016" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0016annotation not available (237 aa)    
Predicted Functional Partners:
XCC3405
Outer membrane receptor proteins mostly Fe transport (959 aa)
   
          0.713
ybjY
ABC transporter permease; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (423 aa)
   
          0.617
XCC0541
annotation not available (252 aa)
   
          0.602
XCC0566
ABC transporter ATP-binding protein; ABC-type antimicrobial peptide transport system, permease component (430 aa)
   
          0.566
XCC0562
Histidine kinase/response regulator hybrid protein-like protein; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation (450 aa)
   
          0.514
XCC3372
Uncharacterized protein; Imidazolonepropionase and related amidohydrolases (422 aa)
   
          0.512
XCC4016
Dipeptidyl-peptidase; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases (815 aa)
   
          0.499
tufB
Elongation factor Tu-A; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (396 aa)
     
      0.495
tufA
Protein-synthesizing GTPase Tu; GTPases - translation elongation factors (396 aa)
     
      0.495
XCC2867
Outer membrane receptor proteins mostly Fe transport (928 aa)
   
          0.492
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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