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fadL protein (Xanthomonas campestris campestris) - STRING interaction network
"fadL" - Outer membrane protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadLOuter membrane protein; Long-chain fatty acid transport protein (450 aa)    
Predicted Functional Partners:
fadB3
Enoyl-CoA hydratase/carnithine racemase; 3-hydroxyacyl-CoA dehydrogenase (690 aa)
   
   
  0.831
fadB2
3-hydroxyacyl-CoA dehydrogenase (790 aa)
   
   
  0.777
XCC4007
annotation not available (215 aa)
 
     
  0.745
ech4
P-hydroxycinnamoyl CoA hydratase/lyase; Enoyl-CoA hydratase/carnithine racemase (275 aa)
         
  0.712
fadA2
3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase; Belongs to the thiolase family (401 aa)
   
   
  0.642
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (439 aa)
           
  0.622
ompW3
Outer membrane protein W (225 aa)
   
     
  0.589
rlpA
Endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides (448 aa)
 
     
  0.572
lptE
LPS-assembly lipoprotein LptE; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (216 aa)
   
     
  0.556
yrbC
Toluene tolerance protein; ABC-type transport system involved in resistance to organic solvents auxiliary component (221 aa)
   
          0.524
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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