STRINGSTRING
XCC0025 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0025" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0025Uncharacterized protein; Putative peptidase (143 aa)    
Predicted Functional Partners:
XCC0845
annotation not available (162 aa)
   
          0.657
xcsN
annotation not available (238 aa)
   
          0.640
gumN
Uncharacterized protein conserved in bacteria (341 aa)
   
          0.638
XCC2630
annotation not available (107 aa)
   
          0.623
XCC4130
annotation not available (324 aa)
   
          0.590
XCC3366
Uncharacterized protein; Methyltransferase (223 aa)
   
          0.586
XCC3590
annotation not available (818 aa)
   
          0.583
XCC0492
annotation not available (114 aa)
   
          0.558
XCC1352
Predicted membrane protein (303 aa)
   
          0.554
uidR
Transcriptional regulator (209 aa)
   
          0.535
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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