STRINGSTRING
XCC0037 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0037" - Pirin-related protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0037Pirin-related protein; Belongs to the pirin family (296 aa)    
Predicted Functional Partners:
azoR
FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity (239 aa)
 
   
  0.871
oprN4
Outer membrane protein (474 aa)
           
  0.585
czcC
Cation efflux system protein; Outer membrane protein (421 aa)
           
  0.581
oprN5
Outer membrane protein (504 aa)
           
  0.581
XCC1728
Pirin-related protein; Belongs to the pirin family (233 aa)
   
          0.490
oprN6
Outer membrane protein (483 aa)
           
  0.485
XCC0040
Transcriptional regulator (300 aa)
 
 
      0.430
XCC2027
Transcriptional regulator (184 aa)
   
 
      0.419
ameR
Transcriptional regulator (207 aa)
   
 
      0.403
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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