STRINGSTRING
XCC0043 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0043" - Transcriptional regulator in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0043Transcriptional regulator (296 aa)    
Predicted Functional Partners:
XCC0042
NonF-related protein; Putative intracellular protease/amidase (225 aa)
              0.609
XCC0041
Uncharacterized protein (101 aa)
              0.579
XCC0494
Transcriptional regulator (300 aa)
   
          0.539
XCC1481
Hydrogen peroxide-inducible genes activator protein; Transcriptional regulator (299 aa)
   
          0.529
XCC3448
Transcriptional regulator (301 aa)
   
          0.514
cysB
Transcriptional regulator (326 aa)
   
          0.483
XCC0040
Transcriptional regulator (300 aa)
 
       
0.481
pcaQ
Transcriptional regulator (333 aa)
   
        0.474
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2 (1490 aa)
 
     
  0.457
trpI
Transcriptional regulator (298 aa)
   
          0.453
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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