close STRING Data Update
The upcoming version of STRING is available for preview: it includes new data, new enrichment categories (e.g. diseases and tissues) and covers 14000 fully sequenced genomes.
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP49378.1Antirepressor regulating drug resistance,predicted signal transduction N-terminal membrane component (567 aa)    
Predicted Functional Partners:
mecI
Methicillin resistance protein; Predicted transcriptional regulator
 
  
 0.980
XCC0047
annotation not available
  
     0.744
XCC3075
annotation not available
  
     0.660
XCC0573
annotation not available
  
     0.657
XCC1496
annotation not available
  
     0.644
XCC2202
Uncharacterized protein; Exonuclease III
  
     0.577
XCC2722
Outer membrane phospholipase A
  
     0.561
XCC2560
annotation not available
  
     0.556
CAP49938.1
annotation not available
  
     0.512
XCC3871
Mn2+-dependent serine/threonine protein kinase
  
     0.511
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (10%) [HD]